STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FRMD7FERM domain containing 7. (656 aa)    
Predicted Functional Partners:
GPR143
G protein-coupled receptor 143.
      
 0.744
HPS5
HPS5 biogenesis of lysosomal organelles complex 2 subunit 2.
      
 0.647
ITSN2
Intersectin 2.
     
 0.622
RAP1B
RAP1B, member of RAS oncogene family.
     
 0.620
ENSAHAP00000027209
annotation not available
     
 0.620
ENSAHAP00000003302
annotation not available
      
 0.599
ENSAHAP00000011129
annotation not available
      
 0.599
NYX
Nyctalopin.
      
 0.592
GRIFIN
Galectin-related inter-fiber protein.
      
 0.592
METTL11B
Methyltransferase like 11B.
      
 0.591
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.