STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GREB1LGREB1 like retinoic acid receptor coactivator. (1876 aa)    
Predicted Functional Partners:
CLP1
Cleavage and polyadenylation factor I subunit 1.
    
   0.726
TSEN2
tRNA splicing endonuclease subunit 2.
    
   0.725
CREBBP
CREB binding protein.
    
 0.723
ESR2
Estrogen receptor 2.
    
 0.717
ESR1
Estrogen receptor 1.
    
 0.717
EP300
E1A binding protein p300.
    
 0.688
CAAP1
Caspase activity and apoptosis inhibitor 1.
      
 0.672
SNX13
Sorting nexin 13.
      
 0.618
ROCK1
Rho associated coiled-coil containing protein kinase 1.
      
 0.615
TOPAZ1
Testis and ovary specific PAZ domain containing 1.
      
 0.597
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.