STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001744annotation not available (959 aa)    
Predicted Functional Partners:
TPR
Translocated promoter region, nuclear basket protein.
   
 0.991
NUP50
Nucleoporin 50.
   
 0.990
NUP98
Nucleoporin 98.
   
 0.987
NUP85
Nucleoporin 85.
    
 0.987
NUP133
Nucleoporin 133.
   
 0.986
NUP43
Nucleoporin 43.
    
 0.985
NUP107
Nucleoporin 107.
   
 0.984
NUP160
Nucleoporin 160.
   
 0.983
NUP88
Nucleoporin 88.
   
 0.983
KPNB1
Karyopherin subunit beta 1.
   
 0.981
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.