STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001746annotation not available (169 aa)    
Predicted Functional Partners:
IHH
Indian hedgehog signaling molecule.
    
 0.966
DHH
Desert hedgehog signaling molecule.
    
 0.966
SHH
Sonic hedgehog signaling molecule.
    
 0.966
ENSAHAP00000001751
annotation not available
 
      0.896
NPAT
Nuclear protein, coactivator of histone transcription.
     
 0.609
BRPF1
Bromodomain and PHD finger containing 1.
   
  
 0.519
HSPBAP1
HSPB1 associated protein 1.
   
  
 0.512
SMO
Smoothened, frizzled class receptor.
   
  
 0.508
DZIP1
DAZ interacting zinc finger protein 1.
      
 0.502
GXYLT1
Glucoside xylosyltransferase 1.
      
 0.501
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.