STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001762annotation not available (248 aa)    
Predicted Functional Partners:
FRMD5
FERM domain containing 5.
 
      0.899
EPB41L5
Erythrocyte membrane protein band 4.1 like 5.
 
   
  0.579
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.571
EPB41L4A
Erythrocyte membrane protein band 4.1 like 4A.
 
   
  0.558
ENSAHAP00000002002
annotation not available
      
 0.546
UBE3A
Ubiquitin protein ligase E3A.
    
 
 0.514
FBXO10
F-box protein 10.
      
 0.500
PSAT1
Phosphoserine aminotransferase 1.
      
 0.477
CNPY4
Canopy FGF signaling regulator 4.
      
 0.447
ISCA1
Iron-sulfur cluster assembly 1.
      
 0.432
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.