STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001762annotation not available (248 aa)    
Predicted Functional Partners:
FRMD5
FERM domain containing 5.
 
      0.899
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.719
EPB41L5
Erythrocyte membrane protein band 4.1 like 5.
 
   
 0.668
EPB41L4A
Erythrocyte membrane protein band 4.1 like 4A.
 
   
 0.652
ENSAHAP00000005176
annotation not available
   
 0.488
ENSAHAP00000005748
annotation not available
   
 0.488
ENSAHAP00000012439
annotation not available
   
 0.488
GPS1
G protein pathway suppressor 1.
    
  0.486
COPS2
COP9 signalosome subunit 2.
    
  0.482
COPS8
COP9 signalosome subunit 8.
    
  0.482
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.