STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDR76WD repeat domain 76. (489 aa)    
Predicted Functional Partners:
HELLS
Helicase, lymphoid specific.
   
 0.982
XPC
XPC complex subunit, DNA damage recognition and repair factor.
   
 0.973
PARP1
poly(ADP-ribose) polymerase 1.
    
 0.972
DDB1
Damage specific DNA binding protein 1.
    
 0.966
XRCC5
X-ray repair cross complementing 5.
    
 
 0.925
XRCC6
X-ray repair cross complementing 6.
    
 
 0.923
CCT2
Chaperonin containing TCP1 subunit 2.
    
   0.916
DDA1
DET1 and DDB1 associated 1.
    
 0.880
ENSAHAP00000000117
annotation not available
    
 0.876
COPS2
COP9 signalosome subunit 2.
    
 0.868
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.