STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001773annotation not available (1720 aa)    
Predicted Functional Partners:
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
     
 0.933
ENSAHAP00000001763
annotation not available
 
      0.899
DENND5B
DENN domain containing 5B.
    
0.610
DENND5A
DENN domain containing 5A.
    
0.610
VPS35
VPS35 retromer complex component.
    
  0.566
ENSAHAP00000026132
annotation not available
    
  0.566
NSMCE3
NSE3 homolog, SMC5-SMC6 complex component.
     
 0.503
ENSAHAP00000009115
annotation not available
     
 0.502
RAB8B
RAB8B, member RAS oncogene family.
    
 0.495
RAB10
RAB10, member RAS oncogene family.
    
 0.495
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.