STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL43Mitochondrial ribosomal protein L43. (150 aa)    
Predicted Functional Partners:
MRPS10
Mitochondrial ribosomal protein S10.
   
 
 0.990
MRPL13
Mitochondrial ribosomal protein L13.
   
 
 0.989
MRPL44
Mitochondrial ribosomal protein L44.
   
 
 0.989
MRPL20
Mitochondrial ribosomal protein L20.
   
 
 0.984
MRPL10
Mitochondrial ribosomal protein L10.
   
 
 0.983
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.982
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.981
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
   
  0.978
MRPS25
Mitochondrial ribosomal protein S25.
   
 
 0.974
NDUFAB1
NADH:ubiquinone oxidoreductase subunit AB1.
   
 0.974
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.