STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB11FIP1RAB11 family interacting protein 1. (1279 aa)    
Predicted Functional Partners:
ENSAHAP00000012334
annotation not available
   
 0.984
ENSAHAP00000001745
annotation not available
   
 0.977
ENSAHAP00000012905
annotation not available
   
 0.977
BRF2
BRF2 RNA polymerase III transcription initiation factor subunit.
 
  
 0.936
RAB11FIP5
RAB11 family interacting protein 5.
    
 0.920
RAB11FIP2
RAB11 family interacting protein 2.
    
 0.913
RAB14
RAB14, member RAS oncogene family.
   
 0.910
ENSAHAP00000000880
annotation not available
    
 0.858
ENSAHAP00000002966
annotation not available
    
 0.858
EHD4
EH domain containing 4.
    
 0.858
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.