Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BRF2BRF2 RNA polymerase III transcription initiation factor subunit. (347 aa)    
Predicted Functional Partners:
ENSAHAP00000000774
annotation not available
    
 0.999
BRF1
BRF1 RNA polymerase III transcription initiation factor subunit.
    
 0.997
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.991
GTF2B
General transcription factor IIB.
     
 0.982
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
     
  0.970
GTF3C5
General transcription factor IIIC subunit 5.
    
 0.970
POLR3A
RNA polymerase III subunit A.
   
 0.970
POLR3B
RNA polymerase III subunit B.
   
 0.967
RPRD1B
Regulation of nuclear pre-mRNA domain containing 1B.
     
  0.963
SNAPC3
Small nuclear RNA activating complex polypeptide 3.
    
  0.954
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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