STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SELENOFSelenoprotein F. (90 aa)    
Predicted Functional Partners:
SELENOM
Selenoprotein M.
   
  
 0.878
SELENOT
Selenoprotein T.
   
  
 0.868
SELENOK
Selenoprotein K.
   
  
 0.865
ENSAHAP00000003408
annotation not available
   
  
 0.864
UGGT2
UDP-glucose glycoprotein glucosyltransferase 2.
    
 
 0.854
UGGT1
UDP-glucose glycoprotein glucosyltransferase 1.
    
 
 0.854
ENSAHAP00000015564
annotation not available
      
 0.808
SELENOO
Selenoprotein O.
      
 0.806
MSRB1
Methionine sulfoxide reductase B1.
      
 0.734
SELENOI
Selenoprotein I.
      
 0.689
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.