STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001827annotation not available (750 aa)    
Predicted Functional Partners:
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
 0.963
SUMO1
Small ubiquitin like modifier 1.
    
 0.954
CREBBP
CREB binding protein.
    
  0.950
RARB
Retinoic acid receptor beta.
    
 0.945
RARA
Retinoic acid receptor alpha.
    
 0.945
MDM2
MDM2 proto-oncogene.
    
 0.939
RNF4
Ring finger protein 4.
    
 0.934
PIN1
Peptidylprolyl cis/trans isomerase, NIMA-interacting 1.
    
 
 0.914
KLHL20
Kelch like family member 20.
    
 
 0.900
HIPK2
Homeodomain interacting protein kinase 2.
    
 
 0.898
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.