STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBCKTBC1 domain containing kinase. (893 aa)    
Predicted Functional Partners:
C12orf4
Chromosome 12 open reading frame 4.
    
 
 0.982
ENSAHAP00000001124
annotation not available
    
 
 0.929
TUSC2
Tumor suppressor 2, mitochondrial calcium regulator.
    
   0.916
PPP1R21
Protein phosphatase 1 regulatory subunit 21.
   
 
 0.815
RBPMS
RNA binding protein, mRNA processing factor.
    
   0.785
NME6
NME/NM23 nucleoside diphosphate kinase 6.
   
  
 0.668
ENSAHAP00000001674
annotation not available
      
 0.658
POLR2E
RNA polymerase II subunit E.
      
 0.630
ENSAHAP00000005626
annotation not available
      
 0.602
PDAP1
PDGFA associated protein 1.
      
 0.601
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.