Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LARGE1LARGE xylosyl- and glucuronyltransferase 1. (739 aa)    
Predicted Functional Partners:
RXYLT1
Ribitol xylosyltransferase 1.
  
  
 0.970
B3GALNT2
beta-1,3-N-acetylgalactosaminyltransferase 2.
     
 0.929
LARGE2
LARGE xylosyl- and glucuronyltransferase 2.
     
  0.893
POMK
Protein O-mannose kinase.
      
 0.823
DAG1
Dystroglycan 1.
     
 0.819
FKTN
Fukutin.
   
  
 0.671
POMGNT1
Protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-).
      
 0.668
POMGNT2
Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).
      
 0.666
POMT1
Protein O-mannosyltransferase 1.
      
 0.642
ENSAHAP00000017330
annotation not available
      
 0.635
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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