STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGALS1Galectin 1. (134 aa)    
Predicted Functional Partners:
LGALS2
Galectin 2.
  
  
0.754
ANXA2
Annexin A2.
   
 
 0.538
PTPRC
Protein tyrosine phosphatase receptor type C.
    
 
 0.528
ANXA1
Annexin A1.
   
 
 0.478
LGALS3
Galectin 3.
   
0.461
ENSAHAP00000026473
annotation not available
    
 0.441
ENSAHAP00000026475
annotation not available
    
 0.441
FAM20B
FAM20B glycosaminoglycan xylosylkinase.
    
 0.419
S100A10
S100 calcium binding protein A10.
   
 0.418
ENSAHAP00000016241
annotation not available
   
  0.400
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.