STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LGALS1Galectin 1. (134 aa)    
Predicted Functional Partners:
LGALS3
Galectin 3.
   
 0.940
LGALS2
Galectin 2.
     
  0.797
ANXA1
Annexin A1.
   
 
 0.617
S100A10
S100 calcium binding protein A10.
   
 
 0.612
ANXA2
Annexin A2.
   
 
 0.600
PTPRC
Protein tyrosine phosphatase receptor type C.
    
 
 0.583
ANLN
Anillin actin binding protein.
    
   0.565
SLC16A1
Solute carrier family 16 member 1.
      
 0.525
SLC1A4
Solute carrier family 1 member 4.
    
 
 0.518
SLC7A9
Solute carrier family 7 member 9.
    
 
 0.517
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.