STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEMA4GSemaphorin 4G. (851 aa)    
Predicted Functional Partners:
PLXNB2
Plexin B2.
    
 0.927
PLXNB1
Plexin B1.
    
 0.927
SEMA4B
Semaphorin 4B.
    
 0.882
ENSAHAP00000001610
annotation not available
    
 0.868
NRP1
Neuropilin 1.
    
 0.791
PLXND1
Plexin D1.
    
 0.735
ENSAHAP00000017416
annotation not available
    
 0.662
PLXNC1
Plexin C1.
    
 0.662
PLXNA4
Plexin A4.
    
 0.662
PLXNA2
Plexin A2.
    
 0.662
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.