STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRR16Proline rich 16. (252 aa)    
Predicted Functional Partners:
VPS13D
Vacuolar protein sorting 13 homolog D.
      
 0.667
TMEM154
Transmembrane protein 154.
      
 0.639
DPH5
Diphthamide biosynthesis 5.
      
 0.628
PHOX2A
Paired like homeobox 2A.
      
 0.591
CACHD1
Cache domain containing 1.
      
 0.586
DOCK10
Dedicator of cytokinesis 10.
      
 0.576
ENSAHAP00000025843
annotation not available
      
 0.576
KCNT2
Potassium sodium-activated channel subfamily T member 2.
      
 0.537
PELI2
Pellino E3 ubiquitin protein ligase family member 2.
      
 0.523
ARAP3
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3.
      
 0.477
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.