STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC24A1Solute carrier family 24 member 1. (646 aa)    
Predicted Functional Partners:
PDE6C
Phosphodiesterase 6C.
      
 0.770
YKT6
YKT6 v-SNARE homolog.
    
  0.711
NDUFS3
NADH:ubiquinone oxidoreductase core subunit S3.
     
 0.646
CENPQ
Centromere protein Q.
      
 0.637
CNGA1
Cyclic nucleotide gated channel subunit alpha 1.
   
 
 0.616
GET4
Guided entry of tail-anchored proteins factor 4.
    
   0.612
PDE6H
Phosphodiesterase 6H.
      
 0.611
HOXB9
Homeobox B9.
      
 0.605
SLC8A1
Solute carrier family 8 member A1.
   
 
 0.597
ENSAHAP00000010141
annotation not available
   
 
 0.597
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.