STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAS1Growth arrest specific 1. (162 aa)    
Predicted Functional Partners:
SHH
Sonic hedgehog signaling molecule.
    
 0.932
PTCH1
Patched 1.
     
 0.919
BOC
BOC cell adhesion associated, oncogene regulated.
    
 0.900
CDON
Cell adhesion associated, oncogene regulated.
    
 0.900
IHH
Indian hedgehog signaling molecule.
    
 0.896
DHH
Desert hedgehog signaling molecule.
    
 0.896
PTCH2
Patched 2.
     
 0.883
ENSAHAP00000000052
annotation not available
     
 0.709
LRP2
LDL receptor related protein 2.
     
 0.709
LRP4
LDL receptor related protein 4.
     
 0.709
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.