STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAS1Growth arrest specific 1. (162 aa)    
Predicted Functional Partners:
SHH
Sonic hedgehog signaling molecule.
    
 0.963
CDON
Cell adhesion associated, oncogene regulated.
    
 0.961
BOC
BOC cell adhesion associated, oncogene regulated.
    
 0.955
PTCH1
Patched 1.
     
 0.951
IHH
Indian hedgehog signaling molecule.
    
 0.944
DHH
Desert hedgehog signaling molecule.
    
 0.939
PTCH2
Patched 2.
     
 0.937
LRP2
LDL receptor related protein 2.
     
 0.870
ENSAHAP00000000052
annotation not available
     
 0.828
LRP4
LDL receptor related protein 4.
     
 0.828
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.