Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SUGCTsuccinyl-CoA:glutarate-CoA transferase. (462 aa)    
Predicted Functional Partners:
MECR
Mitochondrial trans-2-enoyl-CoA reductase.
  
 
 0.916
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 0.869
ACSF3
acyl-CoA synthetase family member 3.
    
 0.839
CBR4
Carbonyl reductase 4.
  
 0.822
HACL1
2-hydroxyacyl-CoA lyase 1.
  
 
 0.765
ENSAHAP00000004800
annotation not available
  
 
 0.765
SCP2
Sterol carrier protein 2.
  
 
 0.753
ENSAHAP00000012625
annotation not available
    
   0.749
ACOX2
acyl-CoA oxidase 2.
  
 
 0.738
ACOX1
acyl-CoA oxidase 1.
  
 
 0.738
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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