STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SAR1ASecretion associated Ras related GTPase 1A. (188 aa)    
Predicted Functional Partners:
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
   
 0.984
PREB
Prolactin regulatory element binding.
   
 0.980
SEC31B
SEC31 homolog B, COPII coat complex component.
   
 0.970
SEC31A
SEC31 homolog A, COPII coat complex component.
   
 0.970
SEC24A
SEC24 homolog A, COPII coat complex component.
   
 0.970
SEC24B
SEC24 homolog B, COPII coat complex component.
   
 0.964
SEC23A
Sec23 homolog A, coat complex II component.
  
 
 0.960
SEC23B
SEC23 homolog B, coat complex II component.
  
 
 0.960
SEC24D
SEC24 homolog D, COPII coat complex component.
   
 0.958
ENSAHAP00000015163
annotation not available
    
 0.958
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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