STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COLEC12Collectin subfamily member 12. (678 aa)    
Predicted Functional Partners:
COLEC11
Collectin subfamily member 11.
   
 
 0.894
ENSAHAP00000004225
annotation not available
   
  0.850
ENSAHAP00000004232
annotation not available
   
  0.850
ENSAHAP00000023106
annotation not available
    
  0.754
ENSAHAP00000009624
annotation not available
    
 0.684
OIT3
Oncoprotein induced transcript 3.
   
 0.668
ENSAHAP00000018382
annotation not available
   
 0.666
ENSAHAP00000005098
annotation not available
   
 0.621
LSP1
Lymphocyte specific protein 1.
    
  0.611
ENSAHAP00000000981
annotation not available
    
  0.591
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.