STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLEC12Collectin subfamily member 12. (678 aa)    
Predicted Functional Partners:
ENSAHAP00000004225
annotation not available
   
 
0.781
ENSAHAP00000004232
annotation not available
   
  0.781
ENSAHAP00000003629
annotation not available
    
0.677
ENSAHAP00000003651
annotation not available
    
 0.677
ENSAHAP00000003741
annotation not available
    
0.677
ENSAHAP00000009624
annotation not available
    
 0.620
ENSAHAP00000018382
annotation not available
   
 0.618
ENSAHAP00000011882
annotation not available
    
  0.564
PTPN6
Protein tyrosine phosphatase non-receptor type 6.
    
  0.564
PTPN11
Protein tyrosine phosphatase non-receptor type 11.
    
  0.564
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.