STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001900annotation not available (459 aa)    
Predicted Functional Partners:
RABL3
RAB, member of RAS oncogene family like 3.
    
 
 0.782
GTPBP8
GTP binding protein 8 (putative).
   
  
 0.769
ERO1B
Endoplasmic reticulum oxidoreductase 1 beta.
      
 0.634
SUMF1
Sulfatase modifying factor 1.
      
 0.634
RER1
Retention in endoplasmic reticulum sorting receptor 1.
      
 0.633
GPR107
G protein-coupled receptor 107.
    
 
 0.621
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
      
 0.582
TCIRG1
T cell immune regulator 1, ATPase H+ transporting V0 subunit a3.
      
 0.581
SRP54
Signal recognition particle 54.
      
 0.572
PDZK1
PDZ domain containing 1.
      
 0.571
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.