STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SENP5SUMO specific peptidase 5. (653 aa)    
Predicted Functional Partners:
TEX10
Testis expressed 10.
   
 0.996
LAS1L
LAS1 like ribosome biogenesis factor.
   
 0.995
WDR18
WD repeat domain 18.
    
 0.975
NOL9
Nucleolar protein 9.
    
 0.962
SUMO1
Small ubiquitin like modifier 1.
   
 0.957
WDR5B
WD repeat domain 5B.
   
 0.952
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.947
ENSAHAP00000004312
annotation not available
   
  0.945
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.942
KAT7
Lysine acetyltransferase 7.
   
 0.942
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.