STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001905annotation not available (124 aa)    
Predicted Functional Partners:
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
   
  0.977
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.936
SORT1
Sortilin 1.
    
 
 0.919
IGF2R
Insulin like growth factor 2 receptor.
    
 
 0.915
SORL1
Sortilin related receptor 1.
    
 
 0.905
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
     
  0.887
ENSAHAP00000006846
annotation not available
   
 0.858
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
     
  0.847
EARS2
glutamyl-tRNA synthetase 2, mitochondrial.
     
 0.842
ARF6
ADP ribosylation factor 6.
    
 
 0.828
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.