STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001909annotation not available (559 aa)    
Predicted Functional Partners:
GSC2
Goosecoid homeobox 2.
      
 0.669
ARID4A
AT-rich interaction domain 4A.
      
 0.593
ITFG1
Integrin alpha FG-GAP repeat containing 1.
      
 0.576
VSX1
Visual system homeobox 1.
      
 0.540
ENSAHAP00000014461
annotation not available
      
 0.477
KCTD9
Potassium channel tetramerization domain containing 9.
      
 0.441
PTPRA
Protein tyrosine phosphatase receptor type A.
      
 0.440
ENSAHAP00000026899
annotation not available
      
 0.440
DENND5B
DENN domain containing 5B.
      
 0.436
DENND5A
DENN domain containing 5A.
      
 0.436
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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