STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000001917annotation not available (874 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
    
 0.951
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
   
 
 0.846
RPA1
Replication protein A1.
    
 0.718
LIN52
Lin-52 DREAM MuvB core complex component.
    
 0.647
LIN54
Lin-54 DREAM MuvB core complex component.
    
 0.643
LIN9
Lin-9 DREAM MuvB core complex component.
    
 0.640
ENSAHAP00000011583
annotation not available
    
 0.594
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 0.594
FANCL
FA complementation group L.
    
  0.583
FANCC
FA complementation group C.
    
  0.583
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.