STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GALCGalactosylceramidase. (634 aa)    
Predicted Functional Partners:
ASAH1
N-acylsphingosine amidohydrolase 1.
     
 0.919
ARSA
Arylsulfatase A.
     
 0.911
UGT8
UDP glycosyltransferase 8.
     
 0.902
GLA
Galactosidase alpha.
     
 0.892
ENSAHAP00000000217
annotation not available
     
 0.885
PSAP
Prosaposin.
    
 
 0.881
GBA2
Glucosylceramidase beta 2.
     
 0.880
CERK
Ceramide kinase.
     
 0.865
GAL3ST1
galactose-3-O-sulfotransferase 1.
     
 0.863
ENSAHAP00000004449
annotation not available
     
 0.863
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.