STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TYMSThymidylate synthetase. (297 aa)    
Predicted Functional Partners:
ENSAHAP00000004230
annotation not available
 
 
 0.997
TK1
Thymidine kinase 1.
  
 
 0.988
DUT
Deoxyuridine triphosphatase.
  
 0.983
MTHFR
Methylenetetrahydrofolate reductase.
    
 0.979
DCTD
dCMP deaminase.
  
 
 0.974
RRM1
Ribonucleotide reductase catalytic subunit M1.
  
 
 0.964
TK2
Thymidine kinase 2.
  
 
 0.963
GART
annotation not available
  
 
 0.962
ENSAHAP00000026974
annotation not available
  
 
 0.962
SHMT2
Serine hydroxymethyltransferase 2.
  
 
 0.961
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.