STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GFAPGlial fibrillary acidic protein. (464 aa)    
Predicted Functional Partners:
ENSAHAP00000000664
annotation not available
    
 
 0.980
NEFL
Neurofilament light.
   
   0.953
MAPT
Microtubule associated protein tau.
   
 
 0.943
CASP3
Caspase 3.
    
 0.914
AQP4
Aquaporin 4.
   
  
 0.908
BDNF
Brain derived neurotrophic factor.
      
 0.885
OLIG3
Oligodendrocyte transcription factor 3.
   
 
 0.883
PDLIM1
PDZ and LIM domain 1.
   
 
 0.878
ENSAHAP00000020505
annotation not available
   
 
 0.875
ENSAHAP00000007362
annotation not available
   
   0.863
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.