STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3RF1SH3 domain containing ring finger 1. (836 aa)    
Predicted Functional Partners:
RHOV
Ras homolog family member V.
    
  0.710
RHOU
Ras homolog family member U.
    
  0.691
CDC42
Cell division cycle 42.
    
 0.683
RAC3
Rac family small GTPase 3.
    
  0.606
RAC2
Rac family small GTPase 2.
    
  0.606
RAC1
Rac family small GTPase 1.
    
  0.606
ENSAHAP00000003813
annotation not available
    
 0.597
ENSAHAP00000003852
annotation not available
    
 0.597
MAPK9
Mitogen-activated protein kinase 9.
    
 
 0.597
PAK3
P21 (RAC1) activated kinase 3.
    
 0.578
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.