STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF103Ring finger protein 103. (608 aa)    
Predicted Functional Partners:
CHMP5
Charged multivesicular body protein 5.
     
  0.864
CHMP2A
Charged multivesicular body protein 2A.
   
 
  0.837
MLKL
Mixed lineage kinase domain like pseudokinase.
    
  0.836
CHMP7
Charged multivesicular body protein 7.
     
  0.835
VPS4B
Vacuolar protein sorting 4 homolog B.
     
 0.824
ENSAHAP00000017367
annotation not available
     
 0.824
CHMP2B
Charged multivesicular body protein 2B.
     
  0.822
CHMP6
Charged multivesicular body protein 6.
     
  0.822
CHMP4B
Charged multivesicular body protein 4B.
   
 
  0.822
CHMP1B
Charged multivesicular body protein 1B.
     
  0.822
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.