STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (846 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.986
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.958
HNRNPA3
Heterogeneous nuclear ribonucleoprotein A3.
   
 0.956
ENSAHAP00000020934
annotation not available
   
 0.942
DHX9
DExH-box helicase 9.
   
 0.932
ENSAHAP00000026107
annotation not available
   
 0.923
ENSAHAP00000025485
annotation not available
   
 0.917
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D like.
   
 0.895
YBX1
Y-box binding protein 1.
   
 0.882
ENSAHAP00000007461
annotation not available
   
 0.863
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.