STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
XYLT1Xylosyltransferase 1. (859 aa)    
Predicted Functional Partners:
B4GALT7
Beta-1,4-galactosyltransferase 7.
     
 0.953
XYLT2
Xylosyltransferase 2.
     
  0.893
ENSAHAP00000017690
annotation not available
    
  0.844
NELFA
Negative elongation factor complex member A.
    
 0.718
NAGPA
N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase.
     
  0.675
POMK
Protein O-mannose kinase.
    
   0.649
FAM20B
FAM20B glycosaminoglycan xylosylkinase.
      
 0.647
B4GALT3
Beta-1,4-galactosyltransferase 3.
    
 0.630
B3GALNT2
beta-1,3-N-acetylgalactosaminyltransferase 2.
     
 0.630
ENSAHAP00000027354
annotation not available
    
 0.630
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.