STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF215Ring finger protein 215. (232 aa)    
Predicted Functional Partners:
RSPO2
R-spondin 2.
    
 0.781
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.717
RSPO1
R-spondin 1.
    
 0.705
RSPO3
R-spondin 3.
    
 0.701
UBOX5
U-box domain containing 5.
    
 0.667
UBXN7
UBX domain protein 7.
   
   0.648
ENSAHAP00000026137
annotation not available
    
 0.622
SUV39H2
Suppressor of variegation 3-9 homolog 2.
    
  0.617
MINDY1
MINDY lysine 48 deubiquitinase 1.
    
  0.548
MINDY2
MINDY lysine 48 deubiquitinase 2.
    
  0.548
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.