STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000002002annotation not available (50 aa)    
Predicted Functional Partners:
ENSAHAP00000021712
annotation not available
   
  0.735
NSMCE3
NSE3 homolog, SMC5-SMC6 complex component.
     
 0.717
DYNC1LI1
Dynein cytoplasmic 1 light intermediate chain 1.
    
 0.712
RUBCN
Rubicon autophagy regulator.
    
  0.711
ENSAHAP00000017599
annotation not available
    
 0.707
MON1A
MON1 homolog A, secretory trafficking associated.
    
 0.707
GDI2
GDP dissociation inhibitor 2.
    
 0.705
VPS16
VPS16 core subunit of CORVET and HOPS complexes.
    
 0.704
ENSAHAP00000004509
annotation not available
      
 0.687
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
    
 0.678
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.