STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YPEL5Yippee like 5. (121 aa)    
Predicted Functional Partners:
ARMC8
Armadillo repeat containing 8.
    
 0.992
RMND5A
Required for meiotic nuclear division 5 homolog A.
    
 
 0.990
GID8
GID complex subunit 8 homolog.
   
 
 0.977
RANBP9
RAN binding protein 9.
   
 
 0.969
WDR26
WD repeat domain 26.
   
 
 0.967
MAEA
Macrophage erythroblast attacher.
    
 
 0.941
MKLN1
Muskelin 1.
    
 
 0.785
FAM162B
Family with sequence similarity 162 member B.
      
 0.764
TMEM167A
Transmembrane protein 167A.
      
 0.758
UBE2H
Ubiquitin conjugating enzyme E2 H.
   
 
 0.703
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.