STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMED3Transmembrane p24 trafficking protein 3. (152 aa)    
Predicted Functional Partners:
TLR3
Toll like receptor 3.
    
 0.961
TLR4
Toll like receptor 4.
    
 0.960
TRAF6
TNF receptor associated factor 6.
    
 0.959
TRAF3
TNF receptor associated factor 3.
    
 0.953
RIPK1
Receptor interacting serine/threonine kinase 1.
    
 0.915
TMED2
Transmembrane p24 trafficking protein 2.
   
 0.907
TMED10
Transmembrane p24 trafficking protein 10.
   
 0.903
TRAF5
TNF receptor associated factor 5.
    
 0.869
ENSAHAP00000008478
annotation not available
   
 0.866
MAP3K7
Mitogen-activated protein kinase kinase kinase 7.
    
 0.866
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.