STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUP98Nucleoporin 98. (1803 aa)    
Predicted Functional Partners:
NUP160
Nucleoporin 160.
   
 0.999
NUP133
Nucleoporin 133.
   
 0.999
ENSAHAP00000005925
annotation not available
   
 0.999
ENSAHAP00000005928
annotation not available
   
 0.999
ENSAHAP00000005962
annotation not available
   
 0.999
NUP155
Nucleoporin 155.
   
 0.999
RAE1
Ribonucleic acid export 1.
   
 0.999
NUP43
Nucleoporin 43.
    
 0.999
NUP93
Nucleoporin 93.
   
 0.999
NUP214
Nucleoporin 214.
   
0.999
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.