STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CMSS1Cms1 ribosomal small subunit homolog. (245 aa)    
Predicted Functional Partners:
WDR36
WD repeat domain 36.
   
  0.997
UTP4
UTP4 small subunit processome component.
   
  0.997
HEATR1
HEAT repeat containing 1.
   
  0.997
NOL6
Nucleolar protein 6.
   
 0.997
UTP6
UTP6 small subunit processome component.
   
  0.992
NOL10
Nucleolar protein 10.
   
 
  0.991
NOC4L
Nucleolar complex associated 4 homolog.
   
  0.990
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 
  0.989
NOP14
NOP14 nucleolar protein.
   
 
  0.989
MPHOSPH10
M-phase phosphoprotein 10.
   
  0.988
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.