STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GJC1Gap junction protein gamma 1. (393 aa)    
Predicted Functional Partners:
GJA4
Gap junction protein alpha 4.
    
  0.972
GJA1
Gap junction protein alpha 1.
    
  0.972
GJC2
Gap junction protein gamma 2.
     
  0.970
GJA8
Gap junction protein alpha 8.
     
  0.963
GJB1
Gap junction protein beta 1.
   
 
 0.960
GJB7
Gap junction protein beta 7.
     
  0.957
GJA3
Gap junction protein alpha 3.
     
  0.953
ENSAHAP00000008347
annotation not available
   
 
  0.940
GJA5
Gap junction protein alpha 5.
     
 0.936
ENSAHAP00000008333
annotation not available
   
 
 0.933
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.