STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD52Ankyrin repeat domain 52. (1064 aa)    
Predicted Functional Partners:
PPP6C
Protein phosphatase 6 catalytic subunit.
   
 0.903
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
    
 0.789
PPP6R2
Protein phosphatase 6 regulatory subunit 2.
    
 0.789
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.765
USP10
Ubiquitin specific peptidase 10.
    
   0.718
TRAF7
TNF receptor associated factor 7.
    
 0.621
ENSAHAP00000017356
annotation not available
    
 0.552
ENO4
Enolase 4.
   
 0.548
NOTCH1
Notch receptor 1.
   
  0.540
CEP170B
Centrosomal protein 170B.
    
 0.535
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.