STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DIDO1Death inducer-obliterator 1. (2313 aa)    
Predicted Functional Partners:
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
   
 0.996
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.996
WDR82
WD repeat domain 82.
   
 0.996
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.996
ENSAHAP00000007128
annotation not available
   
 0.974
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
   
 0.974
WDR5B
WD repeat domain 5B.
    
 0.943
ENSAHAP00000004277
annotation not available
   
  0.928
HCFC2
Host cell factor C2.
   
 0.895
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
    
 0.871
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.