STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNRC6CTrinucleotide repeat containing adaptor 6C. (1804 aa)    
Predicted Functional Partners:
AGO2
Argonaute RISC catalytic component 2.
    
 0.998
PAN2
poly(A) specific ribonuclease subunit PAN2.
    
 
 0.965
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 
 0.965
PAN3
poly(A) specific ribonuclease subunit PAN3.
   
 
 0.957
CNOT8
CCR4-NOT transcription complex subunit 8.
    
 
 0.945
CNOT10
CCR4-NOT transcription complex subunit 10.
    
 
 0.937
AGO3
Argonaute RISC catalytic component 3.
    
 0.899
AGO1
Argonaute RISC component 1.
    
 0.899
ENSAHAP00000025532
annotation not available
    
 0.899
DDX6
DEAD-box helicase 6.
    
 0.889
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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