STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000002188annotation not available (245 aa)    
Predicted Functional Partners:
POMP
Proteasome maturation protein.
      
 0.818
ENSAHAP00000028284
annotation not available
      
 0.618
SORBS2
Sorbin and SH3 domain containing 2.
      
 0.593
FMN1
Formin 1.
      
 0.573
ENSAHAP00000019415
annotation not available
      
 0.573
RBFOX1
RNA binding fox-1 homolog 1.
      
 0.572
ENSAHAP00000006239
annotation not available
      
 0.505
ENSAHAP00000002080
annotation not available
      
 0.474
LOXL1
Lysyl oxidase like 1.
      
 0.435
TMCO1
Transmembrane and coiled-coil domains 1.
      
 0.407
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.