STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFXN2Sideroflexin 2. (469 aa)    
Predicted Functional Partners:
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
    
   0.787
SFXN4
Sideroflexin 4.
  
 
 
 0.703
ENSAHAP00000001745
annotation not available
    
 0.629
ENSAHAP00000012334
annotation not available
    
 0.629
ENSAHAP00000012905
annotation not available
    
 0.629
C12orf73
Chromosome 12 open reading frame 73.
    
 
 0.611
RALGPS1
Ral GEF with PH domain and SH3 binding motif 1.
      
 0.585
ENSAHAP00000021712
annotation not available
    
 0.569
IMMT
Inner membrane mitochondrial protein.
    
 
 0.511
ENSAHAP00000009929
annotation not available
   
  
 0.503
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.