Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEC14L1SEC14 like lipid binding 1. (719 aa)    
Predicted Functional Partners:
SESTD1
SEC14 and spectrin domain containing 1.
      
 0.808
PCYT1A
Phosphate cytidylyltransferase 1, choline, alpha.
    
 
 0.791
C2CD2
C2 calcium dependent domain containing 2.
    
   0.720
PLD1
Phospholipase D1.
   
 
 0.681
KLHL21
Kelch like family member 21.
      
 0.666
DENND3
DENN domain containing 3.
      
 0.643
B4GALT7
Beta-1,4-galactosyltransferase 7.
      
 0.627
ADSS1
Adenylosuccinate synthase 1.
      
 0.615
PPTC7
PTC7 protein phosphatase homolog.
    
   0.612
AP1M1
Adaptor related protein complex 1 subunit mu 1.
     
 0.596
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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