STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PITPNM1Phosphatidylinositol transfer protein membrane associated 1. (1206 aa)    
Predicted Functional Partners:
VAPB
VAMP associated protein B and C.
    
 
 0.983
VAPA
VAMP associated protein A.
    
 
 0.979
BCS1L
BCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone.
   
 
 0.741
TMX2
Thioredoxin related transmembrane protein 2.
      
 0.679
ADGRL3
Adhesion G protein-coupled receptor L3.
      
 0.666
B3GNT5
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5.
      
 0.662
CABP4
Calcium binding protein 4.
    
 
 0.661
AK4
Adenylate kinase 4.
      
 0.639
PPP1R26
Protein phosphatase 1 regulatory subunit 26.
      
 0.634
CCDC39
Coiled-coil domain containing 39.
      
 0.633
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.