STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BIRC7Baculoviral IAP repeat containing 7. (217 aa)    
Predicted Functional Partners:
CASP9
Caspase 9.
   
 0.981
XIAP
X-linked inhibitor of apoptosis.
   
 0.980
ENSAHAP00000008378
annotation not available
    
  0.969
HTRA2
HtrA serine peptidase 2.
    
 0.966
CASP3
Caspase 3.
   
 0.958
ENSAHAP00000007956
annotation not available
    
 0.957
ENSAHAP00000013544
annotation not available
    
 0.955
TRADD
TNFRSF1A associated via death domain.
   
 0.952
RIPK1
Receptor interacting serine/threonine kinase 1.
   
 0.947
BIRC5
Baculoviral IAP repeat containing 5.
    
 0.934
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.