STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM68Transmembrane protein 68. (330 aa)    
Predicted Functional Partners:
LYPLA1
Lysophospholipase 1.
    
 0.673
XKR4
XK related 4.
      
 0.663
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
     
  0.660
PLAG1
PLAG1 zinc finger.
    
 
 0.621
ENSAHAP00000022414
annotation not available
      
 0.603
EPHX2
Epoxide hydrolase 2.
  
 0.557
ETFA
Electron transfer flavoprotein subunit alpha.
    
  0.549
DOLK
Dolichol kinase.
    
  0.545
SCD
stearoyl-CoA desaturase.
   
 0.542
SCD5
stearoyl-CoA desaturase 5.
   
 0.542
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.